| Ministry of Agriculture, Fisheries, and Agrarian Reform | MAFAR HRDP 2023-2025 |
| Ministry of Basic, Higher and Technical Education | |
| Ministry of Environment, Natural Resources and Energy | |
| Ministry of Finance, Budget and Management | |
| Ministry of Health | |
| Ministry of Human Settlements & Development | |
| Ministry of Indigenous Peoples' Affairs | |
| Ministry of Labor and Employment | |
| Ministry of the Interior and Local Government | |
| Ministry of Public Order and Safety | |
| Ministry of Public Works | |
| Ministry of Science and Technology | |
| Ministry of Social Services and Development | |
| Ministry of Transportation and Communcations | |
| Ministry of Trade, Investment and Tourism | |
| Bangsamoro Parliament | |
| Bangsamoro Commision for the Preservation of Cultural Heritage | |
| Bangsamoro Darul-Ifta' | |
| Bangsamoro Human Rights Commission | |
| Bangsamoro Information and Communications Technology Office | |
| Bangsamoro Planning and Development Authority | |
| Bangsamoro Ports Management Authority | |
| Bangsamoro Women Commission | |
| Bangsamoro Youth Commission | |
| Development Academy of the Bangsamoro | |
| Bangsamoro Information Office | |
| Cooperative and Social Enterprises Authority | |
| Bangsamoro Pilgrimage Authority | |
| Bangsamoro Sports Commission | |
| Bangsamoro Board of Investments | |
| Office for Settler Communities | |
